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Biotechnology Information reference sequence refseq collection
Reference Sequence Refseq Collection, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/reference+sequence+collection+(refseq)/biotechnology+information+ncbi+refseq/bio_rxiv__64898__2026__05__02__722384-10-14-23
Average 86 stars, based on 1 article reviews
reference sequence refseq collection - by Bioz Stars, 2026-11
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Article Title: Pebblescout is an easy-to-use tool for fast sequence search in petabase-scale nucleotide resources.
Article Snippet: The publicly available sequence resources GenBank and Sequence Read Archive (SRA) are constantly expanding with new data from across the globe.. Searching these collections in their entirety is com plex and expensive for most researchers.. Hence, users need tools that can find subsets of these resources that are rele vant to their applications.

Article Title: The emergence of nebulin repeats and evolution of lasp family proteins.
Article Snippet: Funding information Initiative for Realizing Diversity in the Research Environment of Chiba University; JSPS KAKENHI, Grant/Award Number: 22570072 Abstract The LIM and SH3 domain protein (lasp) family, the smallest proteins in the nebulin superfamily, consists of vertebrate lasp-1 expressed in various non-muscle tissues, vertebrate lasp-2 expressed in the brain and cardiac muscle, and invertebrate lasp whose functions have been analyzed in Ascidiacea and Insecta.. Gene evolution of the lasp family proteins was investigated by multiple alignments, comparison of gene structure, and synteny analyses in eukaryotes in which mRNA expression was confirmed.. All invertebrates analyzed in this study belonging to the clade Filasterea, with the exception of Placozoa, have at least one lasp gene.

Article Title: Next generation sequencing of STR artifacts produced from historical bone samples.
Article Snippet: STR artifacts are commonly observed in electrophoretic data and can complicate interpretation of the profiles produced.. Even when a consensus approach is applied, reproducible artifacts have the potential to convolute the analysis.. DNA obtained from historical bone samples is often heavily degraded and damaged, requiring the use of more sensitive procedures to increase allele recovery.

Article Title: Genomic Insights into Date Palm Origins
Article Snippet: The Al-Mssallem et al. assembly [ ] has been included in the Reference Sequence (RefSeq) collection at the National Center for Biotechnology Information (NCBI) which offers structural annotations produced by the NCBI automated pipeline, a browser to explore the genome interactively, a Basic Local Alignment Search Tool (BLAST) utility, and many other tools for genome analysis.

Article Title: refseqR : an R package for common computational operations with records on RefSeq collection
Article Snippet: The Reference Sequence (RefSeq) collection at the National Center for Biotechnology Information (NCBI) provides a comprehensive, non-redundant, well-annotated set of sequences, including genomes, transcripts, and proteins.

Sequencing:

Article Title: UNKAI: A protein functional identity prediction model based on ESM-C latent representations and the attention mechanism
Article Snippet: .. Owing to the rapid advancement of genome sequencing technologies, public databases— such as the Reference Sequence (RefSeq) collection of the National Center for Biotechnology Information (NCBI)—now contain hundreds of millions of protein sequences [ ]. ..

Article Title: Enhanced prediction of protein functional identity through the integration of sequence and structural features
Article Snippet: .. The reference sequence (RefSeq) collection of the National Center for Biotechnology Information (NCBI) contains over 300 million protein sequences, yet the number of proteins with known functions is quite limited. ..

Article Title: MEX3A Modulates PPARγ Pathway Activity and Colorectal Cancer Growth
Article Snippet: .. We then restricted the analysis to mutations within annotated RNA transcripts, retrieved from the National Center for Biotechnology Information (NCBI) RNA reference sequence (RefSeq) collection, calling out A-to-G mutations in transcripts encoded by the forward strand and T-to-C mutations in transcripts encoded by the reverse strand. ..



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Biotechnology Information reference sequence refseq collection
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